Forschen • Ausbilden • Vernetzen
Für eine nachhaltige Bioökonomie

Forschen • Ausbilden • Vernetzen
Für eine nachhaltige Bioökonomie

Publikationen

2021

Bongartz, P., I. Bator, K. Baitalow, R. Keller, T. Tiso, L. M. Blank and M. Wessling (2021). A scalable bubble-free membrane aerator for biosurfactant production. Biotechnology and Bioengineering, 114Bio2

Doeker, M., V. Hüttche and A. Jupke (2021). "Reactive extraction for the recovery of primary amines from aqueous streams." Separation and Purification Technology: 118229. HyImPact

Ellis, L. D., N. A. Rorrer, K. P. Sullivan, M. Otto, J. E. McGeehan, Y. Román-Leshkov, N. Wierckx and G. T. Beckham (2021). Chemical and biological catalysis for plastics recycling and upcycling. Nat Catal 4, 539–556. PlastiCycle

Hogenkamp, F., F. Hilgers, A. Knapp, O. Klaus, C. Bier, D. Binder, K.-E. Jaeger, T. Drepper and J. Pietruszka (2021). "Effect of Photocaged Isopropyl β-d-1-thiogalactopyranoside Solubility on the Light Responsiveness of LacI-controlled Expression Systems in Different Bacteria." Chembiochem : a European journal of chemical biology 22(3): 539-547. CombiCom

Höller, M., A. Lunze, C. Wever, A. L. Deutschle, A. Stücker, N. Frase, E. Pestsova, A. C. Spiess, P. Westhoff and R. Pude (2021). "Meadow hay, Sida hermaphrodita (L.) Rusby and Silphium perfoliatum L. as potential non-wood raw materials for the pulp and paper industry." Industrial Crops and Products 167: 113548. Spread

Holtz, A., J. Görtz, C. Kocks, M. Junker and A. Jupke (2021). "Automated measurement of pH-dependent solid-liquid equilibria of itaconic acid and protocatechuic acid." Fluid Phase Equilibria 532: 112893. R2HPBio

Labib, M., J. Görtz, C. Brüsseler, N. Kallscheuer, J. Gätgens, A. Jupke, J. Marienhagen and S. Noack (2021). "Metabolic and Process Engineering for Microbial Production of Protocatechuate from Xylose with Corynebacterium glutamicum." bioRxiv: 2021.2002.2012.430943. HyImPact

Weidener, D., W. Leitner, P. Domínguez de María, H. Klose and P. M. Grande  (2021). "Lignocellulose Fractionation Using Recyclable Phosphoric Acid: Lignin, Cellulose, and Furfural Production."  14(3): 909-916. AP3

 

2020

Bator, I., T. Karmainski, T. Tiso and L. M. Blank (2020): Killing Two Birds With One Stone – Strain Engineering Facilitates the Development of a Unique Rhamnolipid Production Process. Frontiers in Bioengineering and Biotechnology 8:899. Bio2

Bator, I., A. Wittgens, F. Rosenau, T. Tiso and L. M. Blank (2020): Comparison of three xylose pathways in Pseudomonas putida KT2440 for the synthesis of valuable products. Front. Bioeng. Biotechnol. 7: 1-18. Bio2

Baum, C. M. and B. Bartkowski (2020). "It’s not all about funding: Fostering interdisciplinary collaborations in sustainability research from a European perspective." Energy Research & Social Science 70: 101723 CombiCom

Biselli, A., A.-L. Willenbrink, M. Leipnitz and A. Jupke (2020): Development, evaluation, and optimisation of downstream process concepts for rhamnolipids and 3-(3-hydroxyalkanoyloxy)alkanoic acids. Separation and Purification Technology, 117031. Bio2

Blank, L. M., T. Narancic, J. Mampel, T. Tiso and K. O’Connor (2020). "Biotechnological upcycling of plastic waste and other non-conventional feedstocks in a circular economy." Current opinion in biotechnology 62: 212-219. Plasticycle

Blesken, C. C., I. Bator, C. Eberlein, H. J. Heipieper, T. Tiso and L. M. Blank (2020): Genetic cell-surface modification for optimized foam fractionation. Frontiers in Bioengineering and Biotechnology 8 Bio2

Butkowski, O. K., C. M. Baum, A. Pakseresht, S. Bröring and C. J. Lagerkvist (2020). Examining the social acceptance of genetically modified bioenergy in Germany: Labels, information valence, corporate actors, and consumer decisions. Energy Research & Social Science 60:101308. doi: 10.1016/j.erss.2019.101308 CombiCom

Dieken, S. and S. Venghaus (2020). "Potential Pathways to the German Bioeconomy: A Media Discourse Analysis of Public Perceptions."  12(19): 7987 Transform2Bio

Dittrich, J., M. Kather, A. Holzberger, A. Pich and H. Gohlke (2020). Cumulative Submillisecond All-Atom Simulations of the Temperature-Induced Coil-to-Globule Transition of Poly(N-vinylcaprolactam) in Aqueous Solution. Macromolecules 53(22): 9793-9810.
   
Drennhaus, T., L. Öhler, S. Djalali, S. Höfmann, C. Müller, J. Pietruszka and D. Worgull (2020). "Enantioselective Ammonium Ylide Mediated One-Pot Synthesis of Highly Substituted γ-Butyrolactones."  362(12): 2385-2396. PrimACs

Eichler-Löbermann, B., S. Busch, N. D. Jablonowski, M. Kavka and C. Brandt (2020). Mixed Cropping as Affected by Phosphorus and Water Supply. Agronomy, 10, 1506 AP3

Fejzagić, A. V., S. Myllek, F. Hogenkamp, J. Greb, J. Pietruszka and T. Classen (2020). "A Fluorescence-Based Assay System for the Determination of Haloperoxidase-Activity Using a Two-Dimensional Calibration Ap-proach." ChemistryOpen 9(9): 959-966. CombiCom

Habash, S. S., H. U. C. Brass, A. S. Klein, D. P. Klebl, T. M. Weber, T. Classen, J. Pietruszka, F. M. W. Grundler and A. S. S. Schleker (2020). "Novel Prodiginine Derivatives Demonstrate Bioactivities on Plants, Nematodes, and Fungi." Front Plant Sci 11: 579807-579807.CombiCom
    
Habash, S. S., P. P. Könen, A. Loeschcke, M. Wüst, K.-E. Jaeger, T. Drepper, F. M. W. Grundler and A. S. S. Schleker (2020). "The Plant Sesquiterpene Nootkatone Efficiently Reduces Heterodera schachtii Parasitism by Activating Plant Defense." Int J Mol Sci 21(24): 9627.CombiCom
    
Harwoko, H., J. Lee, R. Hartmann, A. Mándi, T. Kurtán, W. E. G. Müller, M. Feldbrügge, R. Kalscheuer, E. Ancheeva, G. Daletos, M. Frank, Z. Liu and P. Proksch (2020). "Azacoccones F-H, new flavipin-derived alkaloids from an endophytic fungus Epicoccum nigrum MK214079." Fitoterapia 146: 104698.CombiCom
    
Hemmerich, J., M. Labib, C. Steffens, S. J. Reich, M. Weiske, M. Baumgart, C. Rückert, M. Ruwe, D. Siebert, V. F. Wendisch, J. Kalinowski, W. Wiechert and M. Oldiges (2020). "Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion."  13(6): 2020-2031. HyImPact
    
Hemmerich, J., N. Tenhaef, W. Wiechert and S. Noack (2020). "pyFOOMB: Python Framework for Object Oriented Modelling of Bioprocesses." bioRxiv: 2020.2011.2010.376665. HyImPact
    
Hermann, A., S. Hill, A. Metz, J. Heck, A. Hoffmann, L. Hartmann and S. Herres-Pawlis (2020). "Next Generation of Zinc Bisguanidine Polymerization Catalysts towards Highly Crystalline, Biodegradable Polyesters."  59(48): 21778-21784. R2HPBio

Holtz, A., D. Weidener, W. Leitner, H. Klose, P. M. Grande and A. Jupke (2020). Process development for separation of lignin from OrganoCat lignocellulose fractionation using antisolvoent precipation. Separation and Purification Technology 236: 116295 AP3

Jäger, V. D., R. Lamm, K. Küsters, G. Ölçücü, M. Oldiges, K.-E. Jaeger, J. Büchs and U. Krauss (2020). "Catalytically-active inclusion bodies for biotechnology—general concepts, optimization, and application." Appl Microbiol Biotechnol 104(17): 7313-7329. CatBIs

Jankowski, N., K. Koschorreck and V. B. Urlacher (2020). High-level expression of aryl-alcohol oxidase2 from Pleurotus eryngii in Pichia pastoris for production of fragrances and bioactive precursors. Appl Microbiol biotechnol 104, 9205-9218 BioDeg

Jansen, R. P., M. F. Müller, S. E. Schröter, J. Kappelmann, B. Klein, M. Oldiges and S. Noack (2020). "Parallelized disruption of prokaryotic and eukaryotic cells via miniaturized and automated bead mill."  20(8): 350-356. HyImPact

Jurischka, S., A. Bida, D. Dohmen-Olma, B. Kleine, J. Potzkei, S. Binder, G. Schaumann, P. J. Bakkes and R. Freudl (2020). "A secretion biosensor for monitoring Sec-dependent protein export in Corynebacterium glutamicum." Microbial Cell Factories 19(1): 11.
    
Kocks, C., J. Görtz, A. Holtz, M. Gausmann and A. Jupke (2020). "Electrochemical Crystallization Concept for Succinic Acid Reduces Waste Salt Production."  92(3): 221-228. R2HPBio

Kubicki, S., I. Bator, S. Jankowski, K. Schipper, T. Tiso, M. Feldbrügge, L. M. Blank, S. Thies and K.-E. Jaeger (2020): A Straightforward Assay for Screening and Quantification of Biosurfactants in Microbial Culture Supernatants. Frontiers in Bioengineering and Biotechnology 8:958 Bio2

Lamm, R., V. D. Jäger, B. Heyman, C. Berg, C. Cürten, U. Krauss, K.-E. Jaeger and J. Büchs (2020). "Detailed small-scale characterization and scale-up of active YFP inclusion body production with Escherichia coli induced by a tetrameric coiled coil domain." Journal of Bioscience and Bioengineering 129(6): 730-740. CatBIs

Lee, J., F. Hilgers, A. Loeschke, K.-E. Jaeger and M. Feldbrügge (2020). Ustilago maydis serves as a novel production host for the synthesis of plant and fungal sesquiterpenoids. Front. Microbiol., 11, 1655CombiCom

Lee, J., Y.-M. Shi, P. Grün, M. Gube, M. Feldbrügge, H. Bode and F. Hennicke (2020). "Identification of Feldin, an Antifungal Polyyne from the Beefsteak Fungus Fistulina hepatica."  10(11): 1502.CombiCom

Leipnitz, M., A. Biselli, M. Merfeld, N. Scholl and A. Jupke (2020). "Model-based selection of the degree of cross-linking of cation exchanger resins for an optimised separation of monosaccharides." Journal of Chromatography A 1610: 460565. AP3

Lück, M., F. Bergs and A. Jupke (2020). Solvent accessibility limitation by plant matrix compounds in extraction of rutin from Solanum lycopersicum. Separation Science Plus 3: 63 - 71

Milke, L. and J. Marienhagen (2020). "Engineering intracellular malonyl-CoA availability in microbial hosts and its impact on polyketide and fatty acid synthesis." Appl Microbiol Biotechnol 104(14): 6057-6065. HyImPact

Milke, L., M. Mutz and J. Marienhagen (2020). "Synthesis of the character impact compound raspberry ketone and additional flavoring phenylbutanoids of biotechnological interest with Corynebacterium glutamicum." Microbial Cell Factories 19(1): 92. HyImPact

Molitor, R., A. Bollinger, S. Kubicki, A. Loeschcke, K. E. Jaeger and S. Thies (2020). "Agar plate-based screening methods for the identification of polyester hydrolysis by Pseudomonas species." Microb Biotechnol 13(1): 274-284.Bio2

Müntjes, K., M. Philipp, L. Hüsemann, N. Heucken, S. Weidtkamp-Peters, K. Schipper, M. D. Zurbriggen and M. Feldbrügge (2020): Establishing Polycistronic gene expression in the model microorganism Ustilago maydis. Frontiers in Microbiology 11:1384 Bio2 CombiCom

Pan, F., D. H. El-Kashef, R. Kalscheuer, W. E. G. Müller, J. Lee, M. Feldbrügge, A. Mándi, T. Kurtán, Z. Liu, W. Wu and P. Proksch (2020). Cladosins L-O, new hybrid polyketides from the endophytic fungus Cladosporium sphaerospermum WBS017. Eur. J. Med. Chem. 191: 113159.CombiCom

Reindl, M., J. Stock, K. P. Hussnaetter, A. Genc, A. Brachmann and K. Schipper (2020). "A Novel Factor Essential for Unconventional Secretion of Chitinase Cts1."  11(1529). UstiOpt

Stoffels, P., M. J. Müller, S. Stachurski, M. Terfrüchte, S. Schröder, N. Ihling, N. Wierckx, M. Feldbrügge, K. Schipper and J. Büchs (2020). Complementing the intrinsic repertoire of Ustilago maydis for degradation of the pectin backbone polygalacturonic acid, Journal of Biotechnology, Volume 307, 2020, 148-163 Bio2 PectiLyse

Tiso, T., N. Ihling, S. Kubicki, A. Biselli, A. Schonhoff, I. Bator, S. Thies, T. Karmainski, S. Kruth, A.-L. Willenbrink, A. Loeschcke, P. Zapp, A. Jupke, K.-E. Jaeger, J. Büchs and L. M. Blank (2020): Integration of Genetic and Process Engineering for Optimized Rhamnolipid Production Using Pseudomonas putida. Frontiers in Bioengineering and Biotechnology 8: 976. Bio2

Tiso, T., D. F. Sauer, K. Beckerle, C. C. Blesken, J. Okuda and L. M. Blank (2020). "A Combined Bio-Chemical Synthesis Route for 1-Octene Sheds Light on Rhamnolipid Structure."  10(8): 874.Bio2

Volkenborn, K., L. Kuschmierz, N. Benz, P. Lenz, A. Knapp and K.-E. Jaeger (2020). "The length of ribosomal binding site spacer sequence controls the production yield for intracellular and secreted proteins by Bacillus subtilis." Microbial Cell Factories 19(1): 154. GlycoHype
    
Waßenhoven, A., C. Block, M. Wustmans and S. Bröring (2020). "Analyzing an emerging business ecosystem through M&A activities: The case of the Bioeconomy."  n/a(n/a). Transform2Bio

Weidener, D., M. Dama, S. K. Dietrich, B. Ohrem, M. Pauly, W. Leitner, P. Domínguez de María, P. M. Grande and H. Klose (2020) Multiscale analysis of lignocellulose recalcitrance towards OrganoCat pretreatment and fractionation. Biotechnology for Biofuels 13: 155 AP3

Weidener, D., A. Holtz, H. Klose, A. Jupke, W. Leitner and P. M. Grande (2020) Lignin Precipitation and Fractionation from OrganoCat Pulping to Obtain Lignin with Different Sizes and Chemical Composition. Molecules 25: 3330 AP3

Weihmann, R., A. Domröse, T. Drepper, K.-E. Jaeger and A. Loeschcke (2020). Protocols for yTREX/Tn5-based gene cluster expression in Pseudomonas putida. Microb Biotechnol. 13(1):250-262.  CombiCom

Widzgowski, J., A. Vogel, L. Altrogge, J. Pfaff, H. Schoof, B. Usadel, L. Nedbal, U. Schurr and C. Pfaff (2020). "High light induces species specific changes in the membrane lipid composition of Chlorella." Biochem J 477(13): 2543-2559.

Wierckx, N., G. Agrimi, P. S. Lübeck, M. G. Steiger, N. P. Mira and P. J. Punt (2020). "Metabolic specialization in itaconic acid production: a tale of two fungi." Current opinion in biotechnology 62: 153-159. Plasticycle

Zhao, X., T. Ploch, S. Noack, W. Wiechert, A. Mitsos and E. von Lieres (2020). "Analysis of the local well-posedness of optimization-constrained differential equations by local optimality conditions."  66(10): e16548.

 

Publikationen aus vorherigen Jahren

Bangash, S. A. K., S. J. Müller-Schüssele, D. Solbach, M. Jansen, F. Fiorani, M. Schwarzländer, S. Kopriva and A. J. Meyer (2019). "Low-glutathione mutants are impaired in growth but do not show an increased sensitivity to moderate water deficit." PLoS One 14(10): e0220589

Bartkowski, B. and C. M. Baum (2019). "Dealing With Rejection: An Application of the Exit–Voice Framework to Genome-Edited Food." 7(57) CombiCom

Belouah, I., C. Bénard, A. Denton, M. Blein-Nicolas, T. Balliau, E. Teyssier, P. Gallusci, O. Bouchez, B. Usadel, M. Zivy, Y. Gibon and S. Colombié (2019). "Transcriptomic and proteomic data in developing tomato fruit." Data in brief 28: 105015-105015

Bénard, V. Mengin, M. Blein-Nicolas, A. K. Denton, T. Balliau, S. Augé, O. Bouchez, J.-P. Mazat, M. Stitt, B. Usadel, M. Zivy, B. Beauvoit, Y. Gibon and S. Colombié (2019). "Modeling Protein Destiny in Developing Fruit." Plant Physiol 180(3): 1709

Bolger, A. M., H. Poorter, K. Dumschott, M. E. Bolger, D. Arend, S. Osorio, H. Gundlach, K. F. X. Mayer, M. Lange, U. Scholz and B. Usadel (2019). "Computational aspects underlying genome to phenome analysis in plants

Brass, H. U. C., A. S. Klein, S. Nyholt, T. Classen and J. Pietruszka (2019). "Condensing Enzymes from Pseudoalteromonadaceae for Prodiginine Synthesis." 361(11): 2659-2667 CombiCom

Bruckner, M., T. Häyhä, S. Giljum, V. Maus, G. Fischer, S. Tramberend and J. Börner (2019). "Quantifying the global cropland footprint of the European Union’s non-food bioeconomy." Environmental Research Letters 14(4): 045011

Bruckner, M., R. Wood, D. Moran, N. Kuschnig, H. Wieland, V. Maus and J. Börner (2019). "FABIO—The Construction of the Food and Agriculture Biomass Input–Output Model

Burmeister, A., F. Hilgers, A. Langner, C. Westerwalbesloh, Y. Kerkhoff, N. Tenhaef, T. Drepper, D. Kohlheyer, E. von Lieres, S. Noack and A. Grünberger (2019). "A microfluidic co-cultivation platform to investigate microbial interactions at defined microenvironments." Lab on a Chip 19(1): 98-110. HyImPact, CombiCom

Carvalho Lemos, V. (2019). "Color for Life: Biosynthesis and Distribution of Phenolic Compounds in Pepper (<i>Capsicum annuum</i>)." Agriculture v. 9(no. 4): 2019 v.2019 no.2014

Claaßen, C., K. Mack and D. Rother (2019). "Benchtop NMR for Online Reaction Monitoring of the Biocatalytic Synthesis of Aromatic Amino Alcohols." 12(4): 1190-1199 HyImPAct

Courville, K. J., L. Frantzeskakis, S. Gul, N. Haeger, R. Kellner, N. Heßler, B. Day, B. Usadel, Y. K. Gupta, H. P. van Esse, A. Brachmann, E. Kemen, M. Feldbrügge and V. Göhre (2019). "Smut infection of perennial hosts: the genome and the transcriptome of the Brassicaceae smut fungus Thecaphora thlaspeos reveal functionally conserved and novel effectors." New Phytologist. PlaMint

Domröse, A., J. Hage-Hülsmann, S. Thies, R. Weihmann, L. Kruse, M. Otto, N. Wierckx, K.-E. Jaeger, T. Drepper and A. Loeschcke (2019) Pseudomonas putida rDNA is a favored site for the expression of biosynthetic genes. Sci Rep 9, 7028 DOI: 10.1038/s41598-019-43405-1 CombiCom, Bio2

Fejzagić, A. V., J. Gebauer, N. Huwa and T. Classen (2019) Halogenating Enzymes for Active Agent Synthesis: First Steps Are Done and Many Have to Follow. Molecules 24(21):4008. doi: 10.3390/molecules24214008 CombiCom

Grande, P. M., D. Weidener, S. Dietrich, M. Dama, M. Bellof, R. Maas, M. Pauly, W. Leitner, H. Klose and P. Domínguez de María (2019). "OrganoCat Fractionation of Empty Fruit Bunches from Palm Trees into Lignin, Sugars, and Cellulose-Enriched Pulp." ACS Omega 4(11): 14451-14457 AP3

Hage-Hülsmann, J., S. Metzger, V. Wewer, F. Buechel, K. Troost, S. Thies, A. Loeschcke, K.-E. Jaeger and T. Drepper (2019). Biosynthesis of cycloartenol by expression of plant and bacterial oxidosqualene cyclases in engineered Rhodobacter capsulatus. J Biotechnol X, 4: 100014.

Harwoko, H., G. Daletos, F. Stuhldreier, J. Lee, S. Wesselborg, M. Feldbrügge, W. E. G. Müller, R. Kalscheuer, E. Ancheeva and P. Proksch (2019). "Dithiodiketopiperazine derivatives from endophytic fungi Trichoderma harzianum and Epicoccum nigrum." Natural Product Research: 1-9 CombiCom

Hemmerich, J., M. Moch, S. Jurischka, W. Wiechert, R. Freudl and M. Oldiges (2019). "Combinatorial impact of Sec signal peptides from Bacillus subtilis and bioprocess conditions on heterologous cutinase secretion by Corynebacterium glutamicum." Biotechnol Bioeng 116(3): 644-655. BIOExpresSPro

Hemmerich, J., N. Tenhaef, C. Steffens, J. Kappelmann, M. Weiske, S. J. Reich, W. Wiechert, M. Oldiges and S. Noack (2019). "Less Sacrifice, More Insight: Repeated Low-Volume Sampling of Microbioreactor Cultivations Enables Accelerated Deep Phenotyping of Microbial Strain Libraries." 14(9): 1800428 HyImPAct

Hilgers, F., N. L. Bitzenhofer, Y. Ackermann, A. Burmeister, A. Grünberger, K.-E. Jaeger and T. Drepper (2019). "Genetically Encoded Photosensitizers as Light-Triggered Antimicrobial Agents." Int J Mol Sci 20(18): 4608 CombiCom

Ihling, N., A. Uhde, R. Scholz, C. Schwarz, L. Schmitt and J. Büchs (2019). "Scale-up of a Type I secretion system in E. coli using a defined mineral medium." n/a(n/a): e2911

Jäger, V. D., R. Kloss, A. Grünberger, S. Seide, D. Hahn, T. Karmainski, M. Piqueray, J. Embruch, S. Longerich, U. Mackfeld, K. E. Jaeger, W. Wiechert, M. Pohl and U. Krauss (2019). "Tailoring the properties of (catalytically)-active inclusion bodies." Microbial Cell Factories 18(1): 33-33

Jäger, V. D., M. Piqueray, S. Seide, M. Pohl, W. Wiechert, K.-E. Jaeger and U. Krauss (2019). "An Enzymatic 2-Step Cofactor and Co-Product Recycling Cascade towards a Chiral 1,2-Diol. Part II: Catalytically Active Inclusion Bodies." 361(11): 2616-2626

Jansen, R., N. Tenhaef, M. Moch, W. Wiechert, S. Noack and M. Oldiges (2019). "FeedER: a feedback-regulated enzyme-based slow-release system for fed-batch cultivation in microtiter plates." Bioprocess and biosystems engineering 42(11): 1843-1852 HyImPAct

Junker-Frohn, L. V., M. Lück, S. Schmittgen, J. Wensing, L. Carraresi, B. Thiele, T. Groher, J. J. Reimer, S. Bröring, G. Noga, A. Jupke, U. Schurr, B. Usadel, A. Wiese-Klinkenberg and A. Wormit (2019). "Tomato’s Green Gold: Bioeconomy Potential of Residual Tomato Leaf Biomass as a Novel Source for the Secondary Metabolite Rutin." ACS Omega 4(21): 19071-19080.

Kallscheuer, N., R. Menezes, A. Foito, M. H. da Silva, A. Braga, W. Dekker, D. M. Sevillano, R. Rosado-Ramos, C. Jardim, J. Oliveira, P. Ferreira, I. Rocha, A. R. Silva, M. Sousa, J. W. Allwood, M. Bott, N. Faria, D. Stewart, M. Ottens, M. Naesby, C. Nunes dos Santos and J. Marienhagen (2019). "Identification and Microbial Production of the Raspberry Phenol Salidroside that Is Active against Huntington’s Disease." Plant Physiol 179(3): 969-985. PNP-EXPRESS

Kappelmann, J., M. Beyß, K. Nöh and S. Noack (2019). "Separation of 13C- and 15N-Isotopologues of Amino Acids with a Primary Amine without Mass Resolution by Means of O-Phthalaldehyde Derivatization and Collision Induced Dissociation." Anal Chem 91(21): 13407-13417 HyImPAct

Klein, S., A. Fiebig, D. Neuwald, D. Dluhosch, L. Müller, G. Groth, G. Noga and M. Hunsche (2019). "Influence of the ethylene related signal-inhibiting octapeptide NOP-1 on postharvest ripening and quality of ‘Golden Delicious’ apples." J. Sci. Food Agric. RIPE

Koch, M., H. Schiedung, N. Siebers, S. McGovern, D. Hofmann, H. Vereecken and W. Amelung (2019). "Quantitative imaging of 33P in plant materials using 14C polymer references." Analytical and bioanalytical chemistry 411(6): 1253-1260

Kocks, C., J. Görtz, A. Holtz, M. Gausmann and A. Jupke (2019). "Electrochemical Crystallization Concept for Succinic Acid Reduces Waste Salt Production." 92(3): 221-228 R2HPBio HyImPAct

König, A., D. Scholzel, B. Uluca, T. Viennet, U. Akbey and H. Heise (2019). "Hyperpolarized MAS NMR of unfolded and misfolded proteins." Solid State Nuclear Magnetic Resonance 98: 1-11

Kubicki, S., A. Bollinger, N. Katzke, K.-E. Jaeger, A. Loeschcke and S. Thies (2019). "Marine Biosurfactants: Biosynthesis, Structural Diversity and Biotechnological Applications." Marine drugs 17(7): 408 Bio2

Milke, L., N. Kallscheuer, J. Kappelmann and J. Marienhagen (2019). "Tailoring Corynebacterium glutamicum towards increased malonyl-CoA availability for efficient synthesis of the plant pentaketide noreugenin." Microbial Cell Factories 18(1): 71-71 HyImPAct

Nietzel, T., M. Elsässer, C. Ruberti, J. Steinbeck, J. M. Ugalde, P. Fuchs, S. Wagner, L. Ostermann, A. Moseler, P. Lemke, M. D. Fricker, S. J. Müller-Schüssele, B. M. Moerschbacher, A. Costa, A. J. Meyer and M. Schwarzländer (2019). "The fluorescent protein sensor roGFP2-Orp1 monitors in vivo H2O2 and thiol redox integration and elucidates intracellular H2O2 dynamics during elicitor-induced oxidative burst in Arabidopsis."  221(3): 1649-1664. PlaMint

Noack, S., Baumgart, M. (2019). Communities of Niche-Optimized Strains: Small-Genome Organism Consortia in Bioproduction. Trends in Biotechnology 37(2): 126-139. HyImPAct

Otten, J., N. Tenhaef, R. P. Jansen, J. Döbber, L. Jungbluth, S. Noack, M. Oldiges, W. Wiechert and M. Pohl (2019). "A FRET-based biosensor for the quantification of glucose in culture supernatants of mL scale microbial cultivations." Microbial Cell Factories 18(1): 143-143 HyImPAct

Otto, M., B. Wynands, T. Drepper, K.-E. Jaeger, S. Thies, A. Loeschcke, L. M. Blank and N. Wierckx (2019). "Targeting 16S rDNA for Stable Recombinant Gene Expression in Pseudomonas." ACS Synthetic Biology 8(8): 1901-1912 CombiCom, Bio2

Ploch, T., X. Zhao, J. Hüser, E. von Lieres, R. Hannemann-Tamás, U. Naumann, W. Wiechert, A. Mitsos and S. Noack (2019). "Multiscale dynamic modeling and simulation of a biorefinery." Biotechnol Bioeng 116(10): 2561-2574 HyImPAct

Saur, K. M., O. Brumhard, K. Scholz, H. Hayen and T. Tiso (2019). "A pH shift induces high-titer liamocin production in Aureobasidium pullulans." Appl Microbiol Biotechnol 103(12): 4741-4752 HyImPAct

Schäfer, P. M., P. McKeown, M. Fuchs, R. D. Rittinghaus, A. Hermann, J. Henkel, S. Seidel, C. Roitzheim, A. N. Ksiazkiewicz, A. Hoffmann, A. Pich, M. D. Jones and S. Herres-Pawlis (2019). "Tuning a robust system: N,O zinc guanidine catalysts for the ROP of lactide." Dalton Transactions 48(18): 6071-6082 R2HPBio

Schwacke, R., G. Y. Ponce-Soto, K. Krause, A. M. Bolger, B. Arsova, A. Hallab, K. Gruden, M. Stitt, M. E. Bolger and B. Usadel (2019). "MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis." Molecular Plant 12(6): 879-892

Schwinges, P., S. Pariyar, F. Jakob, M. Rahimi, L. Apitius, M. Hunsche, L. Schmitt, G. Noga, C. Langenbach, U. Schwaneberg and U. Conrath (2019). A bifuncitonal dermasseptin-thanatin dipeptide functionalizes the crop surface for sustainable pest management. Green Chemistry

Siebers, N., D. Hofmann, H. Schiedung, A. Landsrath, B. Ackermann, L. Gao, P. Mojzeš, N. D. Jablonowski, L. Nedbal and W. Amelung (2019). "Towards phosphorus recycling for agriculture by algae: Soil incubation and rhizotron studies using 33P-labeled microalgal biomass." Algal Research 43: 101634 AlgalFertilizer

Stella, R. G., J. Wiechert, S. Noack and J. Frunzke (2019). "Evolutionary engineering of Corynebacterium glutamicum." 14(9): 1800444 HyImPAct

Troost, K., A. Loeschcke, F. Hilgers, A. Y. Özgür, T. M. Weber, B. Santiago-Schübel, V. Svensson, J. Hage-Hülsmann, S. S. Habash, F. M. W. Grundler, A. S. S. Schleker, K.-E. Jaeger and T. Drepper (2019). "Engineered Rhodobacter capsulatus as a Phototrophic Platform Organism for the Synthesis of Plant Sesquiterpenoids." 10(1998) CombiCom

Villajuana-Bonequi, M., A. Matei, C. Ernst, A. Hallab, B. Usadel and G. Doehlemann (2019). "Cell type specific transcriptional reprogramming of maize leaves during Ustilago maydis induced tumor formation." Sci Rep 9(1): 10227

Von, C., Wagner, Lask, Magenau, Bauerle, C. Von, S. Warrach, Elbersen, Staritsky, E. Van, Iqbal, Jablonowski, Happe, Fernando, Scordia, Cosentino, Wulfmeyer, Lewandowski and Winkler (2019). "Prospects of Bioenergy Cropping Systems for A More Social-Ecologically Sound Bioeconomy." 9(10): 605 AP3

Wang, L., C. Kuchendorf and S. Willbold (2019). "Determination of individual chain length and chain-length distribution of polyphosphates in microalgae by 31P-DOSY-NMR." Algal Research 43: 101631 QuantiP

Wever, C., M. Höller, L. Becker, A. Biertümpfel, J. Köhler, D. van Inghelandt, P. Westhoff, R. Pude and E. Pestsova (2019). Towards high-biomass yielding bioenergy crop Silphium perfoliatum L.: phenotypic and genotypic evaluation of five cultivated populations. Biomass and Bioenergy 124: 102-113 SPREAD

Yang, B., C. Voiniciuc, L. Fu, S. Dieluweit, H. Klose and B. Usadel (2019). "TRM4 is essential for cellulose deposition in Arabidopsis seed mucilage by maintaining cortical microtubule organization and interacting with CESA3." The New phytologist 221(2): 881-895

Aschenbroich, J., K. P. Hussnaetter, P. Stoffels, T. Langner, S. Zander, B. Sandrock, M. Bölker, M. Feldbrügge and K. Schipper (2018) The germinal centre kinase Don3 is crucial for unconventional secretion of chitinase Cts1 in Ustilago maydis. BBA: Proteins and Proteomics, special issue unconventional protein secretion. BBA - Proteins and Proteomics

Baaske, J., P. Gonschorek, R. Engesser, A. Dominguez-Monedero, K. Raute, P. Fischbach, K. Müller, E. Cachat, W. W. A. Schamel, S. Minguet, J. A. Davies, J. Timmer, W. Weber and M. D. Zurbriggen (2018). "Dual-controlled optogenetic system for the rapid down-regulation of protein levels in mammalian cells." Sci Rep 8(1): 15024. CombiCom

Berg, S., L. M. Cloutier and S. Bröring (2018). "Collective stakeholder representations and perceptions of drivers of novel biomass-based value chains." Journal of Cleaner Production 200: 231-24

Bollinger, A., S. Thies, N. Katzke and K.-E. Jaeger (2018). "The biotechnological potential of marine bacteria in the novel lineage of Pseudomonas pertucinogena." Microbial Biotechnology. Bio2

Borge, L. and S. Bröring (2018). "What affects technology transfer in emerging knowledge areas? A multi-stakeholder concept mapping study in the bioeconomy." Journal of Technology Transfer. S2B-BioEcon
    
Bronikowski, A., K. Koschorreck and V. B. Urlacher (2018). "Redesign of a New Manganese Peroxidase Highly Expressed in Pichia pastoris towards a Lignin-Degrading Versatile Peroxidase." ChemBioChem 19(23): 2481-2489. BioDeg
    
Carraresi, L., S. Berg and S. Bröring (2018). "Emerging value chains within the bioeconomy: Structural changes in the case of phosphate recovery." Journal of Cleaner Production 183: 87-101. P-ENG
  
Champreda, V., P. Unrean, B. Klein, J. Gätgens and S. Noack (2018). "Elucidating cellular mechanisms of Saccharomyces cerevisiae tolerant to combined lignocellulosic-derived inhibitors using high-throughput phenotyping and multiomics analyses." FEMS Yeast Research 18(8). HyImPAct
    
Classen, T. and J. Pietruszka (2018). "Complex molecules, clever solutions – Enzymatic approaches towards natural product and active agent syntheses." Bioorganic & Medicinal Chemistry 26(7): 1285-1303. CombiCom
   
Eck, A., M. Schmidt, S. Hamer, A. J. Ruff, J. Förster, U. Schwaneberg, L. M. Blank, W. Wiechert and M. Oldiges (2018). "Improved microscale cultivation of Pichia pastoris for clonal screening." Fungal Biol Biotechnol 5: 8-8. P-ENG

Endres, S., M. Wingen, J. Torra, R. Ruiz-González, T. Polen, G. Bosio, N. L. Bitzenhofer, F. Hilgers, T. Gensch, S. Nonell, K.-E. Jaeger and T. Drepper (2018). "An optogenetic toolbox of LOV-based photosensitizers for light-driven killing of bacteria." Sci Rep 8(1): 15021.CombiCom

Freier, L. and E. von Lieres (2018). "Robust Multi-Objective Global Optimization of Stochastic Processes With a Case Study in Gradient Elution Chromatography." Biotechnology Journal 13(1): 1700257. BIOExpresSPro

Freudl, R. (2018). "Signal peptides for recombinant protein secretion in bacterial expression systems." Microbial Cell Factories 17(1): 52. BIOExpresSPro

Groher, T., S. Schmittgen, A. Fiebig, G. Noga and M. Hunsche (2018). "Suitability of fluorescence indices for the estimation of fruit maturity compounds in tomato fruits." Journal of the Science and Food Agriculture 98(15): 5656-5665. InducTomE
   
Groher, T., S. Schmittgen, G. Noga and M. Hunsche (2018). "Limitation of mineral supply as tool for the induction of secondary metabolites accumulation in tomato leaves." Plant Physiology and Biochemistry 130: 105-111. InducTomE
    
Hage-Hülsmann, J., A. Grünberger, S. Thies, B. Santiago-Schübel, A. S. Klein, J. Pietruszka, D. Binder, F. Hilgers, A. Domröse, T. Drepper, D. Kohlheyer, K.-E. Jaeger and A. Loeschcke (2018). "Natural biocide cocktails: Combinatorial antibiotic effects of prodigiosin and biosurfactants." PLoS One 13(7): e0200940. CombiCom, Bio2
    
Hartmann, S. K., Y. Stockdreher, G. Wandrey, H. Hosseinpour Tehrani, T. Zambanini, A. J. Meyer, J. Büchs, L. M. Blank, M. Schwarzländer and N. Wierckx (2018). "Online in vivo monitoring of cytosolic NAD redox dynamics in Ustilago maydis." Biochimica et Biophysica Acta (BBA) - Bioenergetics 1859(10): 1015-1024. ROXENSE
 
Hemmerich, J., S. Noack, W. Wiechert and M. Oldiges (2018). "Microbioreactor Systems for Accelerated Bioprocess Development." Biotechnology Journal 13(4): 1700141. HyImPAct
    
Hemmerich, J., N. Tenhaef, C. Steffens, J. Kappelmann, M. Weiske, S. J. Reich, W. Wiechert, M. Oldiges and S. Noack (2018). "Less Sacrifice, More Insight: Repeated Low-Volume Sampling of Microbioreactor Cultivations Enables Accelerated Deep Phenotyping of Microbial Strain Libraries." Biotechnology Journal. HyImPAct
    
Herweg, E., M. Schöpping, K. Rohr, A. Siemen, O. Frank, T. Hofmann, U. Deppenmeier and J. Büchs (2018). "Production of the potential sweetener 5-ketofructose from fructose in fed-batch cultivation with Gluconobacter oxydans." Bioresource Technology 259: 164-172. GLUFACT
    
Ihling, N., N. Bittner, S. Diederichs, M. Schelden, A. Korona, G. T. Höfler, A. Fulton, K.-E. Jaeger, K. Honda, H. Ohtake and J. Büchs (2018). "Online measurement of the respiratory activity in shake flasks enables the identification of cultivation phases and patterns indicating recombinant protein production in various Escherichia coli host strains." Biotechnol. Prog. 34(2): 315-327. BioBreak
    
Jäger, V. D., R. Lamm, R. Kloß, E. Kaganovitch, A. Grünberger, M. Pohl, J. Büchs, K.-E. Jaeger and U. Krauss (2018). "A Synthetic Reaction Cascade Implemented by Colocalization of Two Proteins within Catalytically Active Inclusion Bodies." ACS Synthetic Biology 7(9): 2282-2295. CatIBs

Kallscheuer, N. and J. Marienhagen (2018). "Corynebacterium glutamicum as platform for the production of hydroxybenzoic acids." Microbial Cell Factories 17(1): 70-70. HyImPAct
    
Klein, A. S., H. U. C. Brass, D. P. Klebl, T. Classen, A. Loeschcke, T. Drepper, S. Sievers, K.-E. Jaeger and J. Pietruszka (2018). "Cover Feature: Preparation of Cyclic Prodiginines by Mutasynthesis in Pseudomonas putida KT2440." ChemBioChem 19(14): 1462-1462. CombiCom, Bio2
    
Kloss, R., T. Karmainski, V. D. Jäger, D. Hahn, A. Grünberger, M. Baumgart, U. Krauss, K.-E. Jaeger, W. Wiechert and M. Pohl (2018). "Tailor-made catalytically active inclusion bodies for different applications in biocatalysis." Catalysis Science & Technology 8(22): 5816-5826. CatIBs
    
Kloss, R., M. H. Limberg, U. Mackfeld, D. Hahn, A. Grünberger, V. D. Jäger, U. Krauss, M. Oldiges and M. Pohl (2018). "Catalytically active inclusion bodies of L-lysine decarboxylase from E. coli for 1,5-diaminopentane production." Sci Rep 8(1): 5856-5856. CatIBs
    
Kranz, A., A. Steinmann, U. Degner, A. Mengus-Kaya, S. Matamouros, M. Bott and T. Polen (2018). "Global mRNA decay and 23S rRNA fragmentation in Gluconobacter oxydans 621H." BMC genomics 19(1): 753-753. GLUFACT
    
Milić, D., M. Dick, D. Mulnaes, C. Pfleger, A. Kinnen, H. Gohlke and G. Groth (2018). "Recognition motif and mechanism of ripening inhibitory peptides in plant hormone receptor ETR1." Sci Rep 8(1): 3890-3890. RIPE
    
Morschett, H., V. Loomba, G. Huber, W. Wiechert, E. von Lieres and M. Oldiges (2018). "Laboratory-scale photobiotechnology—current trends and future perspectives." FEMS Microbiology Letters 365(1). HyImPAct
    
Müller, M. J., S. Stachurski, P. Stoffels, K. Schipper, M. Feldbrügge and J. J. J. o. B. E. Büchs (2018). "Online evaluation of the metabolic activity of Ustilago maydis on (poly)galacturonic acid." Journal of Biological Engineering 12(1): 34. PectiLyse

Pariyar, S. and G. Noga (2018). "Rainfall does not impair particulate matter accumulation on peri-urban field crops, but improves photosynthetic activity at UV exposure." Environmental and Experimental Botany 156. greenRelease
    
Schreiber, C., H. Schiedung, L. Harrison, C. Briese, B. Ackermann, J. Kant, S. D. Schrey, D. Hofmann, D. Singh, O. Ebenhöh, W. Amelung, U. Schurr, T. Mettler-Altmann, G. Huber, N. D. Jablonowski and L. Nedbal (2018). Evaluating potential of green alga Chlorella vulgaris to accumulate phosphorus and to fertilize nutrient-poor soil substrates for crop plants. Journal of Applied Phycology.  AlgalFertilizer

Siebers, M., T. Rohr, M. Ventura, V. Schütz, S. Thies, F. Kovacic, K.-E. Jaeger, M. Berg, P. Dörmann and M. Schulz (2018). "Disruption of microbial community composition and identification of plant growth promoting microorganisms after exposure of soil to rapeseed-derived glucosinolates." PLoS One 13(7): e0200160. LIPANO
    
Siemen, A., K. Kosciow, P. Schweiger, U. J. A. M. Deppenmeier and Biotechnology (2018). "Production of 5-ketofructose from fructose or sucrose using genetically modified Gluconobacter oxydans strains." Appl Microbiol Biotechnol 102(4): 1699-1710. GLUFACT

Singh, D., L. Nedbal and O. Ebenhöh (2018). "Modelling phosphorus uptake in microalgae." Biochemical Society Transactions 46(2): 483-490. AlgalFertilizer
    
Tenhaef, N., C. Brüsseler, A. Radek, R. Hilmes, P. Unrean, J. Marienhagen and S. Noack (2018). "Production of d-xylonic acid using a non-recombinant Corynebacterium glutamicum strain." Bioresource Technology 268: 332-339. HyImPAct
    
Terfrüchte, M., S. Wewetzer, P. Sarkari, D. Stollewerk, M. Franz-Wachtel, B. Macek, T. Schlepütz, M. Feldbrügge, J. Büchs and K. Schipper (2018). "Tackling destructive proteolysis of unconventionally secreted heterologous proteins in Ustilago maydis." J Biotechnol 284: 37-51. UstiOpt
    
Uluca, B., T. Viennet, D. Petrović, H. Shaykhalishahi, F. Weirich, A. Gönülalan, B. Strodel, M. Etzkorn, W. Hoyer and H. Heise (2018). "DNP-Enhanced MAS NMR: A Tool to Snapshot Conformational Ensembles of α-Synuclein in Different States." Biophysical Journal 114(7): 1614-1623. BioCaPS

Unrean, P., J. Gätgens, B. Klein, S. Noack and V. Champreda (2018). "Elucidating cellular mechanisms of Saccharomyces cerevisiae tolerant to combined lignocellulosic-derived inhibitors using high-throughput phenotyping and multiomics analyses." FEMS Yeast Research 18(8).  HyImPAct    

Weidener, D., H. Klose, W. Leitner, U. Schurr, B. Usadel, P. Domínguez de María and P. M. Grande (2018). "One-Step Lignocellulose Fractionation by using 2,5-Furandicarboxylic Acid as a Biogenic and Recyclable Catalyst." ChemSusChem 11(13): 2051-2056. AP3
    
Zhang, S., C. Bisterfeld, J. Bramski, N. Vanparijs, B. G. De Geest, J. Pietruszka, A. Böker and S. Reinicke (2018). "Biocatalytically Active Thin Films via Self-Assembly of 2-Deoxy-d-ribose-5-phosphate Aldolase–Poly(N-isopropylacrylamide) Conjugates." Bioconjugate Chemistry 29(1): 104-116. FlowCom

Borge, L. and S. Bröring (2017). Exploring effectiveness of technology transfer in interdisciplinary settings: The case of the bioeconomy. Creativity and Innovation Management 26(3): 311-322.  S2B-BioEcon

Bronikowski, A., P.-L. Hagedoorn, K. Koschorreck and V. B. Urlacher (2017). Expression of a new laccase from Moniliophthora roreri at high levels in Pichia pastoris and its potential application in micropollutant degradation. AMB Express 7: 73. BioDeg

Damm, T., P. M. Grande, N. D. Jablonowski, B. Thiele, U. Disko, U. Mann, U. Schurr, W. Leitner, B. Usadel, P. Domínguez de María and H. Klose (2017). OrganoCat pretreatment of perennial plants: Synergies between a biogenic fractionation and valuable feedstocks. Bioresource Technology 244(Part 1): 889-896. OrCaCel

Damm, T., S. Pattathil, M. Günl, N. D. Jablonowski, M. O'Neill, K. S. Grün, P. M. Grande, W. Leitner, U. Schurr, B. Usadel and H. Klose (2017). Insights into cell wall structure of sida hermaphrodita and its influence on recalcitrance. Carbohydrate Polymers 168: 94-102.   OrCaCel 

De Col, V., P. Fuchs, T. Nietzel, M. Elsasser, C. P. Voon, A. Candeo, I. Seeliger, M. D. Fricker, C. Grefen, I. M. Moller, A. Bassi, B. L. Lim, M. Zancani, A. J. Meyer, A. Costa, S. Wagner and M. Schwarzlander (2017). ATP sensing in living plant cells reveals tissue gradients and stress dynamics of energy physiology. Elife 6.   CoSens

Domröse, A., R. Weihmann, S. Thies, K.-E. Jaeger, T. Drepper and A. Loeschcke (2017). Rapid generation of recombinant Pseudomonas putida secondary metabolite producers using yTREX. Synthetic and Systems Biotechnology 2(4): 310-319.   CombiCom

Frantzeskakis, L., K. J. Courville, L. Plucker, R. Kellner, J. Kruse, A. Brachmann, M. Feldbrugge and V. Gohre (2017). The plant-dependent life cycle of thecaphora thlaspeos: A smut fungus adapted to brassicaceae. Mol Plant Microbe Interact: Mpmi08160164r.   PlaMint

Heck, A. and T. Drepper (2017). Engineering photosynthetic α-proteobacteria for the production of recombinant proteins and terpenoids. Modern topics in the phototrophic prokaryotes: Environmental and applied aspects. Hallenbeck, P.C. Cham, Springer International Publishing: 395-425.   BIOExpresSPro

Hemmerich, J., L. Freier, W. Wiechert, E. von Lieres and M. Oldiges (2017). "Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology." J Vis Exp(130): 56234. BIOExpresSPro

Heydenreich, F. M., T. Miljus, R. Jaussi, R. Benoit, D. Milic and D. B. Veprintsev (2017). High-throughput mutagenesis using a two-fragment PCR approach. Sci Rep 7(1): 6787. RIPE

Hussner, A., I. Stiers, M. J. J. M. Verhofstad, E. S. Bakker, B. M. C. Grutters, J. Haury, J. L. C. H. van Valkenburg, G. Brundu, J. Newman, J. S. Clayton, L. W. J. Anderson and D. Hofstra (2017). Management and control methods of invasive alien freshwater aquatic plants: A review. Aquatic Botany 136: 112-137.   AquaPro

Jablonowski, N. D., T. Kollmann, M. Nabel, T. Damm, H. Klose, M. Müller, M. Bläsing, S. Seebold, S. Krafft, I. Kuperjans, M. Dahmen and U. Schurr (2017). Valorization of sida (sida hermaphrodita) biomass for multiple energy purposes. GCB Bioenergy 9(1): 202-214.   OrCaCel 

Junker LV, T. B., Wiese-Klinkenberg A (2017) Induktion des Sekundärmetabolismus in Tomatenpflanzen zur alternativen Verwendung der Blattbiomasse. DGG-Proceedings, 7(10), 1-5. InducTomE

Kellner, R. and V. Göhre (2017). Thecaphora thlaspeos–ein Brandpilz spezialisiert auf Modellpflanzen. BIOspektrum 23(5): 498-500.  PlaMint

Kessenbrock, M., S. M. Klein, L. Muller, M. Hunsche, G. Noga and G. Groth (2017). Novel Protein-Protein Inhibitor Based Approach to Control Plant Ethylene Responses: Synthetic Peptides for Ripening Control. Front Plant Sci 8: 1528. RIPE

Klein, A. S., A. Domröse, P. Bongen, H. U. C. Brass, T. Classen, A. Loeschcke, T. Drepper, L. Laraia, S. Sievers, K.-E. Jaeger and J. Pietruszka (2017). New Prodigiosin Derivatives Obtained by Mutasynthesis in Pseudomonas putida. ACS Synthetic Biology 6(9):1757–1765. CombiCom

Krauss, U., V. D. Jager, M. Diener, M. Pohl and K. E. Jaeger (2017). Catalytically-active inclusion bodies-Carrier-free protein immobilizates for application in biotechnology and biomedicine. J Biotechnol 258: 136-147. CatIBs

Loeschcke, A., D. Dienst, V. Wewer, J. Hage-Hulsmann, M. Dietsch, S. Kranz-Finger, V. Huren, S. Metzger, V. B. Urlacher, T. Gigolashvili, S. Kopriva, I. M. Axmann, T. Drepper and K. E. Jaeger (2017). The photosynthetic bacteria Rhodobacter capsulatus and Synechocystis sp. PCC 6803 as new hosts for cyclic plant triterpene biosynthesis. PLoS One 12(12): e0189816.   CombiCom

Meurer, R. A., S. Kemper, S. Knopp, T. Eichert, F. Jakob, H. E. Goldbach, U. Schwaneberg and A. Pich (2017). Biofunctional Microgel-Based Fertilizers for Controlled Foliar Delivery of Nutrients to Plants. Angew Chem Int Ed Engl 56(26): 7380-7386.  GreenGel, RIPE

Moudříková, Š., L. Nedbal, A. Solovchenko and P. Mojzeš (2017). Raman microscopy shows that nitrogen-rich cellular inclusions in microalgae are microcrystalline guanine. Algal Research 23: 216-222.   AlgalFertilizer

Moudrikova, S., A. Sadowsky, S. Metzger, L. Nedbal, T. Mettler-Altmann and P. Mojzes (2017). Quantification of Polyphosphate in Microalgae by Raman Microscopy and by a Reference Enzymatic Assay. Anal Chem 89(22): 12006-12013.  AlgalFertilizer

Reinicke, S., H. C. Rees, P. Espeel, N. Vanparijs, C. Bisterfeld, M. Dick, R. R. Rosencrantz, G. Brezesinski, B. G. de Geest, F. E. Du Prez, J. Pietruszka and A. Boker (2017). Immobilization of 2-deoxy-d-ribose-5-phosphate aldolase in polymeric thin films via the langmuir-schaefer technique. ACS Appl Mater Interfaces 9(9): 8317-8326.   FlowCom

Terfrüchte, M., M. Reindl, S. Jankowski, P. Sarkari, M. Feldbrügge and K. Schipper (2017). Applying unconventional secretion in ustilago maydis for the export of functional nanobodies. International Journal of Molecular Sciences 18(5): 937.  UstiOpt

Viennet, T., M. M. Wördehoff, B. Uluca, C. Poojari, H. Shaykhalishahi, D. Willbold, B. Strodel, H. Heise, A. K. Buell, W. Hoyer and M. Etzkorn (2017). "A structural and kinetic link between membrane association and amyloid fibril formation of α-Synuclein." bioRxiv: 173724. BioCaPS

Welters, T., T. Horn, A. J. Ruff, U. Schwaneberg and J. Buchs (2017). Novel technique for high throughput measurement of active monooxygenase concentration. Biotechnol Bioeng 114(4): 929-933.   MoRe-Plants

Worgull, D. Ö., Laura; Strache, Joss, Pepe; Friedrichs, Teresa; Ullrich, Patrick (2017) Enantioselective synthesisof 2,3-dihydrofurans via ammonium ylides. Eur J Org Chem, 6077-6080. PrimACs

Zambanini, T., S. K. Hartmann, L. M. Schmitz, L. Büttner, H. H. Tehrani, E. Geiser, M. Beudels, D. Venc, G. Wandrey, J. Büchs, M. Schwarzländer, L. M. Blank and N. Wierckx (2017)  Promoters from the itaconate cluster of Ustilago maydis are induced by nitrogen depletion. Fungal Biol Biotechnol 4:11. ROXENSE

Zhao, X, Noack, S, Wiechert, W and Lieres, EV (2017). Dynamic flux balance analysis with nonlinear objective function. J Math Biol.   BEProMod

Bisterfeld, C., I. Küberl, M. Dick and J. Pietruszka (2016). A fluorogenic screening for enantio- and diastereoselectivity of 2-deoxy-d-ribose-5-phosphate aldolases. Synlett 27(01): 11-16.   FlowCom

Bosch, K., L. Frantzeskakis, M. Vranes, J. Kamper, K. Schipper and V. Gohre (2016). Genetic manipulation of the plant pathogen ustilago maydis to study fungal biology and plant microbe interactions. J Vis Exp(115).   PlaMint

Damm, T., U. Commandeur, R. Fischer, B. Usadel and H. Klose (2016). Improving the utilization of lignocellulosic biomass by polysaccharide modification. Process Biochemistry 51(2): 288-296.   OrCaCel

Dick, M., R. Hartmann, O. H. Weiergraber, C. Bisterfeld, T. Classen, M. Schwarten, P. Neudecker, D. Willbold and J. Pietruszka (2016). Mechanism-based inhibition of an aldolase at high concentrations of its natural substrate acetaldehyde: Structural insights and protective strategies. Chemical Science 7(7): 4492-4502.   FlowCom

Dick, M., O. H. Weiergräber, T. Classen, C. Bisterfeld, J. Bramski, H. Gohlke and J. Pietruszka (2016). Trading off stability against activity in extremophilic aldolases. Scientific Reports 6: 17908.   FlowCom

Diener, M., B. Kopka, M. Pohl, K.-E. Jaeger and U. Krauss (2016). Fusion of a coiled-coil domain facilitates the high-level production of catalytically active enzyme inclusion bodies. ChemCatChem 8(1): 142-152.   CatIBs

Freier, L., J. Hemmerich, K. Schöler, W. Wiechert, M. Oldiges and E. von Lieres (2016). Framework for kriging-based iterative experimental analysis and design: Optimization of secretory protein production in corynebacterium glutamicum. Engineering in Life Sciences 16(6): 538-549.   BIOExpresSPro

Geiser, E., F. Ludwig, T. Zambanini, N. Wierckx and L. M. Blank (2016). Draft genome sequences of itaconate-producing ustilaginaceae. Genome Announc 4(6).   PectiLyse

Geiser, E., S. K. Przybilla, M. Engel, W. Kleineberg, L. Buttner, E. Sarikaya, T. D. Hartog, J. Klankermayer, W. Leitner, M. Bolker, L. M. Blank and N. Wierckx (2016). Genetic and biochemical insights into the itaconate pathway of ustilago maydis enable enhanced production. Metab Eng 38: 427-435.  PectiLyse

Geiser, E., M. Reindl, L. M. Blank, M. Feldbrugge, N. Wierckx and K. Schipper (2016). Activating intrinsic carbohydrate-active enzymes of the smut fungus ustilago maydis for the degradation of plant cell wall components. Appl Environ Microbiol 82(17): 5174-5185.   UstiLyse

Hemmerich, J., P. Rohe, B. Kleine, S. Jurischka, W. Wiechert, R. Freudl and M. Oldiges (2016). Use of a sec signal peptide library from bacillus subtilis for the optimization of cutinase secretion in corynebacterium glutamicum. Microbial Cell Factories 15(1): 208.   BIOExpresSPro

Kosciow, K., C. Domin, P. Schweiger and U. Deppenmeier (2016). Extracellular targeting of an active endoxylanase by a tolb negative mutant of gluconobacter oxydans. J Ind Microbiol Biotechnol 43(7): 989-999.   GLUFACT

Lenders, M. H., T. Beer, S. H. Smits and L. Schmitt (2016). In vivo quantification of the secretion rates of the hemolysin a type i secretion system. Sci Rep 6: 33275.   BioBreak

Li, Z., N. Omranian, L. Neumetzler, T. Wang, T. Herter, B. Usadel, T. Demura, P. Giavalisco, Z. Nikoloski and S. Persson (2016). A transcriptional and metabolic framework for secondary wall formation in arabidopsis. Plant Physiol 172(2): 1334-1351.   OrCaCel

Lotz, J., M. Schwalbach and U. Naumann (2016). A case study in adjoint sensitivity analysis of parameter calibration. Procedia Computer Science 80: 201-211.  BEProMod 

MacKellar, D., L. Lieber, J. S. Norman, A. Bolger, C. Tobin, J. W. Murray, M. Oksaksin, R. L. Chang, T. J. Ford, P. Q. Nguyen, J. Woodward, H. R. Permingeat, N. S. Joshi, P. A. Silver, B. Usadel, A. W. Rutherford, M. L. Friesen and J. Prell (2016). Streptomyces thermoautotrophicus does not fix nitrogen. Scientific Reports 6: 20086.   BIOExpresSPro

Nguyen, G. T., G. Erlenkamp, O. Jack, A. Kuberl, M. Bott, F. Fiorani, H. Gohlke and G. Groth (2016). Chalcone-based selective inhibitors of a c4 plant key enzyme as novel potential herbicides. Sci Rep 6: 27333.   C4-PSH

Safiran, N., J. Lotz and U. Naumann (2016). Algorithmic differentiation of numerical methods: Second-order adjoint solvers for parameterized systems of nonlinear equations. Procedia Computer Science 80: 2231-2235.   BEProMod

Sarkari, P., M. Feldbrügge and K. Schipper (2016). The corn smut fungus ustilago maydis as an alternative expression system for biopharmaceuticals. Gene expression systems in fungi: Advancements and applications. Schmoll, M. and Dattenböck, C. Cham, Springer International Publishing: 183-200.   UstiOpt

Solovchenko, A., A. M. Verschoor, N. D. Jablonowski and L. Nedbal (2016). Phosphorus from wastewater to crops: An alternative path involving microalgae. Biotechnol Adv 34(5): 550-564.   AlgalFertilizer

Stock, J., M. Terfruchte and K. Schipper (2016). A reporter system to study unconventional secretion of proteins avoiding n-glycosylation in ustilago maydis. Methods Mol Biol 1459: 149-160.   UstiOpt

Voiniciuc, C., E. Zimmermann, M. H. Schmidt, M. Gunl, L. Fu, H. M. North and B. Usadel (2016). Extensive natural variation in arabidopsis seed mucilage structure. Front Plant Sci 7: 803.   EnZIP

Witzel, C.-P. and R. Finger (2016). Economic evaluation of miscanthus production – a review. Renewable and Sustainable Energy Reviews 53(C): 681-696.   MisCas

Domrose, A., A. S. Klein, J. Hage-Hulsmann, S. Thies, V. Svensson, T. Classen, J. Pietruszka, K. E. Jaeger, T. Drepper and A. Loeschcke (2015). Efficient recombinant production of prodigiosin in pseudomonas putida. Front Microbiol 6: 972.   LIPANO

Grande, P. M., J. Viell, N. Theyssen, W. Marquardt, P. Dominguez de Maria and W. Leitner (2015). Fractionation of lignocellulosic biomass using the organocat process. Green Chemistry 17(6): 3533-3539.   OrCaCel

Kiefler, I., S. Bringer and M. Bott (2015). Sdhe-dependent formation of a functional acetobacter pasteurianus succinate dehydrogenase in gluconobacter oxydans--a first step toward a complete tricarboxylic acid cycle. Appl Microbiol Biotechnol 99(21): 9147-9160.   GLUFACT

Klose, H., M. Gunl, B. Usadel, R. Fischer and U. Commandeur (2015). Cell wall modification in tobacco by differential targeting of recombinant endoglucanase from trichoderma reesei. BMC Plant Biol 15: 54.   EnZIP

Lang, V., B. Usadel and G. Obermeyer (2015). De novo sequencing and analysis of the lily pollen transcriptome: An open access data source for an orphan plant species. Plant Mol Biol 87(1-2): 69-80.   PNP-EXPRESS

Loeschcke, A. and S. Thies (2015). Pseudomonas putida-a versatile host for the production of natural products. Appl Microbiol Biotechnol 99(15): 6197-6214.   LIPANO

Lotz, J., U. Naumann, R. Hannemann-Taḿas, T. Ploch and A. Mitsos (2015). Higher-order discrete adjoint ode solver in c++ for dynamic optimization. Procedia Computer Science 51: 256-265.   BEProMod

María, P. D. d., P. M. Grande and W. Leitner (2015). Current trends in pretreatment and fractionation of lignocellulose as reflected in industrial patent activities. Chemie Ingenieur Technik 87(12): 1686-1695.   OrCaCel

Meyer, M., P. Schweiger and U. Deppenmeier (2015). Succinic semialdehyde reductase gox1801 from gluconobacter oxydans in comparison to other succinic semialdehyde-reducing enzymes. Appl Microbiol Biotechnol 99(9): 3929-3939.   GLUFACT

Moseler, A., I. Aller, S. Wagner, T. Nietzel, J. Przybyla-Toscano, U. Muhlenhoff, R. Lill, C. Berndt, N. Rouhier, M. Schwarzlander and A. J. Meyer (2015). The mitochondrial monothiol glutaredoxin s15 is essential for iron-sulfur protein maturation in arabidopsis thaliana. Proc Natl Acad Sci U S A 112(44): 13735-13740.   CoSens

Torra, J., A. Burgos-Caminal, S. Endres, M. Wingen, T. Drepper, T. Gensch, R. Ruiz-Gonzalez and S. Nonell (2015). Singlet oxygen photosensitisation by the fluorescent protein pp2fbfp l30m, a novel derivative of pseudomonas putida flavin-binding pp2fbfp. Photochem Photobiol Sci 14(2): 280-287.   BIOExpresSPro

van Summeren-Wesenhagen, P. V. and J. Marienhagen (2015). Metabolic engineering of escherichia coli for the synthesis of the plant polyphenol pinosylvin. Appl Environ Microbiol 81(3): 840-849.   PNP-EXPRESS

van Summeren-Wesenhagen, P. V., R. Voges, A. Dennig, S. Sokolowsky, S. Noack, U. Schwaneberg and J. Marienhagen (2015). Combinatorial optimization of synthetic operons for the microbial production of p-coumaryl alcohol with escherichia coli. Microb Cell Fact 14: 79.   PNP-EXPRESS

Voiniciuc, C., M. Gunl, M. H. Schmidt and B. Usadel (2015). Highly branched xylan made by irregular xylem14 and mucilage-related21 links mucilage to arabidopsis seeds. Plant Physiol 169(4): 2481-2495.   EnZIP

Voiniciuc, C., M. H. Schmidt, A. Berger, B. Yang, B. Ebert, H. V. Scheller, H. M. North, B. Usadel and M. Gunl (2015). Mucilage-related10 produces galactoglucomannan that maintains pectin and cellulose architecture in arabidopsis seed mucilage. Plant Physiol 169(1): 403-420.   EnZIP

Kosciow, K., N. Zahid, P. Schweiger and U. Deppenmeier (2014). Production of a periplasmic trehalase in gluconobacter oxydans and growth on trehalose. J Biotechnol 189: 27-35.   GLUFACT

Loehrer, M., A. Vogel, B. Huettel, R. Reinhardt, V. Benes, S. Duplessis, B. Usadel and U. Schaffrath (2014). On the current status of phakopsora pachyrhizi genome sequencing. Front Plant Sci 5: 377.   GLUFACT; BIOExpresSPro

Noack, S. and W. Wiechert (2014). Quantitative metabolomics: A phantom? Trends Biotechnol 32(5): 238-244.  

Paulus, J. K., K. Forster and G. Groth (2014). Direct and selective small-molecule inhibition of photosynthetic pep carboxylase: New approach to combat c4 weeds in arable crops. FEBS Lett 588(12): 2101-2106.   C4-PSH

Terfruchte, M., B. Joehnk, R. Fajardo-Somera, G. H. Braus, M. Riquelme, K. Schipper and M. Feldbrugge (2014). Establishing a versatile golden gate cloning system for genetic engineering in fungi. Fungal Genet Biol 62: 1-10.  

Zeiser, J., L. H. Muhlenbeck, P. Schweiger and U. Deppenmeier (2014). Characterization of a periplasmic quinoprotein from sphingomonas wittichii that functions as aldehyde dehydrogenase. Appl Microbiol Biotechnol 98(5): 2067-2079.

Feldbrugge, M., R. Kellner and K. Schipper (2013). The biotechnological use and potential of plant pathogenic smut fungi. Appl Microbiol Biotechnol 97(8): 3253-3265.  

Geiser, E., N. Wierckx, M. Zimmermann and L. M. Blank (2013). Identification of an endo-1,4-beta-xylanase of ustilago maydis. BMC Biotechnol 13: 59.